STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM164Transmembrane protein 164. (299 aa)    
Predicted Functional Partners:
SERTM1
Serine rich and transmembrane domain containing 1.
      
 0.681
TMEM14A
Transmembrane protein 14A.
      
 0.648
FAM91A1
Family with sequence similarity 91 member A1.
      
 0.621
SPAG5
Sperm associated antigen 5.
      
 0.595
TMEM187
Transmembrane protein 187.
      
 0.512
ST3GAL3
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.502
TMEM132A
Transmembrane protein 132A.
      
 0.500
TMEM62
Transmembrane protein 62.
      
 0.480
DENND1A
Uncharacterized protein.
      
 0.479
PBDC1
Polysaccharide biosynthesis domain containing 1.
      
 0.449
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.