STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMMECR1AMMECR1 domain-containing protein. (223 aa)    
Predicted Functional Partners:
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
    
   0.685
HMGB3
High mobility group box 3.
   
  
 0.560
FNTA
Farnesyltransferase, CAAX box, alpha.
    
   0.511
STK26
Serine/threonine kinase 26.
   
  
 0.499
TLK2
Tousled like kinase 2.
      
 0.498
MEMO1
Mediator of cell motility 1.
  
    0.496
MTMR14
Myotubularin related protein 14.
      
 0.491
GPATCH3
G-patch domain containing 3.
      
 0.462
NAXE
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
   
  
 0.448
DDX50
DExD-box helicase 50.
   
  
 0.435
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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