STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTLNCentlein. (1264 aa)    
Predicted Functional Partners:
SUN5
Sad1 and UNC84 domain containing 5.
      
 0.737
SPATA6
Spermatogenesis associated 6.
      
 0.725
NIN
Uncharacterized protein.
      
 0.674
SPATC1
Spermatogenesis and centriole associated 1.
      
 0.659
CCP110
Centriolar coiled-coil protein 110.
      
 0.642
CEP170
Centrosomal protein 170.
      
 0.626
SAMD4B
Sterile alpha motif domain containing 4B.
      
 0.612
SASS6
SAS-6 centriolar assembly protein.
      
 0.593
PMFBP1
Polyamine modulated factor 1 binding protein 1.
      
 0.593
PLK4
Polo like kinase 4.
      
 0.582
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.