STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FARS2Phenylalanyl-tRNA synthetase 2, mitochondrial. (451 aa)    
Predicted Functional Partners:
FARSB
Phenylalanyl-tRNA synthetase subunit beta.
  
 0.981
NDUFAF5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
 
 
   0.903
FARSA
Phenylalanyl-tRNA synthetase subunit alpha.
   
 
 0.900
LRRC47
Leucine rich repeat containing 47.
  
 0.878
PARS2
Prolyl-tRNA synthetase 2, mitochondrial.
   
  
 0.845
EARS2
Glutamyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.839
YARS1
Tyrosine--tRNA ligase.
  
  
 0.798
LARS2
Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.796
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
   0.778
NARS2
Asparaginyl-tRNA synthetase 2, mitochondrial.
  
  
 0.729
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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