Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SLCO4A1Solute carrier organic anion transporter family member. (728 aa)    
Predicted Functional Partners:
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 
 0.611
EFCAB9
EF-hand calcium binding domain 9.
   
 
 0.510
CATSPERZ
Catsper channel auxiliary subunit zeta.
    
 
 0.462
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 
 0.448
G3UIJ0_LOXAF
Ion_trans domain-containing protein.
    
 
 0.446
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
    
 
 0.432
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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