STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMD3FERM domain containing 3. (596 aa)    
Predicted Functional Partners:
RASEF
RAS and EF-hand domain containing.
      
 0.837
G3U8H1_LOXAF
Uncharacterized protein.
      
 0.739
PSAT1
Phosphoserine aminotransferase.
      
 0.691
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.608
TLE1
TLE family member 1, transcriptional corepressor.
      
 0.604
TLE4
TLE family member 4, transcriptional corepressor.
      
 0.581
GNAQ
G protein subunit alpha q.
      
 0.578
SNRPN
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.569
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
 
      0.558
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.510
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.