STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSDE1Cold shock domain containing E1. (799 aa)    
Predicted Functional Partners:
STRAP
Serine/threonine kinase receptor associated protein.
   
 
 0.970
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.839
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
   
 0.836
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.827
YBX1
Y-box binding protein 1.
   
 0.826
RALBP1
RalA binding protein 1.
    
 0.822
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.814
RASA1
RAS p21 protein activator 1.
   
 0.803
SOS2
SOS Ras/Rho guanine nucleotide exchange factor 2.
   
 0.801
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.797
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.