Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SKIDA1SKI/DACH domain containing 1. (818 aa)    
Predicted Functional Partners:
PHF19
PHD finger protein 19.
    
 
 0.843
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 
 0.840
MTF2
Metal response element binding transcription factor 2.
    
 
 0.808
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.790
CPOX
Uncharacterized protein.
    
   0.767
EED
Embryonic ectoderm development.
   
 
 0.761
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.701
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.642
PBRM1
Polybromo 1.
   
 0.622
RIOX1
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.622
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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