STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FICDFIC domain containing. (458 aa)    
Predicted Functional Partners:
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
    
 
 0.816
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
      
 0.796
SH3D19
SH3 domain containing 19.
      
 0.737
ANKEF1
Ankyrin repeat and EF-hand domain containing 1.
      
 0.680
TRMT11
tRNA methyltransferase 11 homolog.
      
 0.634
ZMYND8
Zinc finger MYND-type containing 8.
      
 0.630
RIPK4
Receptor interacting serine/threonine kinase 4.
      
 0.618
ANKRD45
ANK_REP_REGION domain-containing protein.
    
 
 0.607
SASH1
SAM and SH3 domain containing 1.
      
 0.597
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
 
      0.572
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.