STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HAX1HCLS1-associated protein X-1; Recruits the Arp2/3 complex to the cell cortex and regulates reorganization of the cortical actin cytoskeleton via its interaction with KCNC3 and the Arp2/3 complex. Slows down the rate of inactivation of KCNC3 channels. Promotes GNA13-mediated cell migration. Involved in the clathrin-mediated endocytosis pathway. May be involved in internalization of ABC transporters such as ABCB11. May inhibit CASP9 and CASP3. Promotes cell survival. May regulate intracellular calcium pools. (263 aa)    
Predicted Functional Partners:
IL1A
Interleukin-1; Belongs to the IL-1 family.
    
 
 0.805
NUDCD1
NudC domain containing 1.
    
   0.764
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
 
 0.581
HTRA2
HtrA serine peptidase 2.
    
 
 0.576
HCLS1
Hematopoietic cell-specific Lyn substrate 1.
    
 
 0.560
CSF3R
Colony stimulating factor 3 receptor.
   
  
 0.555
AKAP10
A-kinase anchoring protein 10.
    
   0.540
SAV1
Salvador family WW domain containing protein 1.
    
   0.540
G3T5G6_LOXAF
Rhomboid domain-containing protein.
   
  
 0.505
G6PC3
Glucose-6-phosphatase; Belongs to the glucose-6-phosphatase family.
      
 0.501
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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