STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SELESelectin E. (618 aa)    
Predicted Functional Partners:
G3TVI4_LOXAF
Uncharacterized protein.
   
 0.967
GLG1
Golgi glycoprotein 1.
    
 0.911
NFKB1
Nuclear factor kappa B subunit 1.
   
 0.875
CD34
CD34 molecule.
    
 0.842
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.827
CD44
CD44 molecule (Indian blood group).
    
 0.765
NFKB2
Nuclear factor kappa B subunit 2.
   
 0.682
CD63
Tetraspanin.
     
 0.678
SNX17
Sorting nexin 17.
    
 
 0.636
PECAM1
Platelet and endothelial cell adhesion molecule 1.
   
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.