STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAWRUncharacterized protein. (51 aa)    
Predicted Functional Partners:
MRPL11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
      
 0.791
PTPRQ
Protein tyrosine phosphatase receptor type Q.
      
 0.745
SPSB1
SplA/ryanodine receptor domain and SOCS box containing 1.
    
   0.663
SPSB4
SplA/ryanodine receptor domain and SOCS box containing 4.
    
   0.663
NAV2
Neuron navigator 2.
      
 0.659
FANCC
FA complementation group C.
      
 0.624
E2F7
E2F transcription factor 7.
      
 0.624
DDR2
Discoidin domain receptor tyrosine kinase 2.
      
 0.575
CCHCR1
Coiled-coil alpha-helical rod protein 1.
      
 0.546
VAMP4
Vesicle associated membrane protein 4.
      
 0.525
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.