GPBP1 protein (Loxodonta africana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

GPBP1

GC-rich promoter binding protein 1. (493 aa)

Predicted Functional Partners:

FNDC11

0.793

NNT

0.551

PSMC1

0.547

CNOT2

0.500

VBP1

0.500

EAPP

0.492

ND2

0.491

ZZZ3

0.490

DRG2

0.485

SH3D19

0.465

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNOT2	GPBP1	ENSLAFP00000004008	ENSLAFP00000006048	CCR4-NOT transcription complex subunit 2.	GC-rich promoter binding protein 1.	0.500
DRG2	EAPP	ENSLAFP00000026866	ENSLAFP00000008847	Developmentally regulated GTP binding protein 2.	E2F associated phosphoprotein.	0.593
DRG2	GPBP1	ENSLAFP00000026866	ENSLAFP00000006048	Developmentally regulated GTP binding protein 2.	GC-rich promoter binding protein 1.	0.485
EAPP	DRG2	ENSLAFP00000008847	ENSLAFP00000026866	E2F associated phosphoprotein.	Developmentally regulated GTP binding protein 2.	0.593
EAPP	GPBP1	ENSLAFP00000008847	ENSLAFP00000006048	E2F associated phosphoprotein.	GC-rich promoter binding protein 1.	0.492
FNDC11	GPBP1	ENSLAFP00000017630	ENSLAFP00000006048	Fibronectin type III domain containing 11.	GC-rich promoter binding protein 1.	0.793
GPBP1	CNOT2	ENSLAFP00000006048	ENSLAFP00000004008	GC-rich promoter binding protein 1.	CCR4-NOT transcription complex subunit 2.	0.500
GPBP1	DRG2	ENSLAFP00000006048	ENSLAFP00000026866	GC-rich promoter binding protein 1.	Developmentally regulated GTP binding protein 2.	0.485
GPBP1	EAPP	ENSLAFP00000006048	ENSLAFP00000008847	GC-rich promoter binding protein 1.	E2F associated phosphoprotein.	0.492
GPBP1	FNDC11	ENSLAFP00000006048	ENSLAFP00000017630	GC-rich promoter binding protein 1.	Fibronectin type III domain containing 11.	0.793
GPBP1	ND2	ENSLAFP00000006048	ENSLAFP00000029492	GC-rich promoter binding protein 1.	NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	0.491
GPBP1	NNT	ENSLAFP00000006048	ENSLAFP00000008750	GC-rich promoter binding protein 1.	Nicotinamide nucleotide transhydrogenase.	0.551
GPBP1	PSMC1	ENSLAFP00000006048	ENSLAFP00000004149	GC-rich promoter binding protein 1.	Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.	0.547
GPBP1	SH3D19	ENSLAFP00000006048	ENSLAFP00000014569	GC-rich promoter binding protein 1.	SH3 domain containing 19.	0.465
GPBP1	VBP1	ENSLAFP00000006048	ENSLAFP00000025874	GC-rich promoter binding protein 1.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.500
GPBP1	ZZZ3	ENSLAFP00000006048	ENSLAFP00000009520	GC-rich promoter binding protein 1.	Uncharacterized protein.	0.490
ND2	GPBP1	ENSLAFP00000029492	ENSLAFP00000006048	NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	GC-rich promoter binding protein 1.	0.491
ND2	NNT	ENSLAFP00000029492	ENSLAFP00000008750	NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	Nicotinamide nucleotide transhydrogenase.	0.527
NNT	GPBP1	ENSLAFP00000008750	ENSLAFP00000006048	Nicotinamide nucleotide transhydrogenase.	GC-rich promoter binding protein 1.	0.551
NNT	ND2	ENSLAFP00000008750	ENSLAFP00000029492	Nicotinamide nucleotide transhydrogenase.	NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	0.527

page 1 of 2

Server load: low (10%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About