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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDOD-aspartate oxidase. (341 aa)    
Predicted Functional Partners:
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.960
GOT1
Aspartate aminotransferase.
     
 0.929
GOT2
Aspartate aminotransferase.
     
 0.921
NIT2
Nitrilase family member 2.
   
 
 0.919
G3UN85_LOXAF
Amine oxidase.
   
 
 0.905
G3TRE3_LOXAF
Amine oxidase.
     
  0.900
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.876
IDH1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.876
CS
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.867
MDH1
Malate dehydrogenase.
   
 
 0.826
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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