WDR86 protein (Loxodonta africana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

WDR86

WD_REPEATS_REGION domain-containing protein. (361 aa)

Predicted Functional Partners:

TXNDC9

0.804

SKOR2

0.737

CCT5

0.699

RBX1

0.678

CDC6

0.677

PDCL

0.669

CUL1

0.631

PKP3

0.631

CCT3

0.624

CCT7

0.597

Your Current Organism:

Loxodonta africana

NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT3	CCT5	ENSLAFP00000004517	ENSLAFP00000005126	T-complex protein 1 subunit gamma.	Chaperonin containing TCP1 subunit 5.	0.999
CCT3	CCT7	ENSLAFP00000004517	ENSLAFP00000003332	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
CCT3	PDCL	ENSLAFP00000004517	ENSLAFP00000009972	T-complex protein 1 subunit gamma.	Phosducin like.	0.909
CCT3	TXNDC9	ENSLAFP00000004517	ENSLAFP00000005206	T-complex protein 1 subunit gamma.	Thioredoxin domain containing 9.	0.934
CCT3	WDR86	ENSLAFP00000004517	ENSLAFP00000006083	T-complex protein 1 subunit gamma.	WD_REPEATS_REGION domain-containing protein.	0.624
CCT5	CCT3	ENSLAFP00000005126	ENSLAFP00000004517	Chaperonin containing TCP1 subunit 5.	T-complex protein 1 subunit gamma.	0.999
CCT5	CCT7	ENSLAFP00000005126	ENSLAFP00000003332	Chaperonin containing TCP1 subunit 5.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
CCT5	PDCL	ENSLAFP00000005126	ENSLAFP00000009972	Chaperonin containing TCP1 subunit 5.	Phosducin like.	0.970
CCT5	TXNDC9	ENSLAFP00000005126	ENSLAFP00000005206	Chaperonin containing TCP1 subunit 5.	Thioredoxin domain containing 9.	0.846
CCT5	WDR86	ENSLAFP00000005126	ENSLAFP00000006083	Chaperonin containing TCP1 subunit 5.	WD_REPEATS_REGION domain-containing protein.	0.699
CCT7	CCT3	ENSLAFP00000003332	ENSLAFP00000004517	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.999
CCT7	CCT5	ENSLAFP00000003332	ENSLAFP00000005126	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1 subunit 5.	0.999
CCT7	PDCL	ENSLAFP00000003332	ENSLAFP00000009972	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Phosducin like.	0.977
CCT7	TXNDC9	ENSLAFP00000003332	ENSLAFP00000005206	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Thioredoxin domain containing 9.	0.833
CCT7	WDR86	ENSLAFP00000003332	ENSLAFP00000006083	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	WD_REPEATS_REGION domain-containing protein.	0.597
CDC6	CUL1	ENSLAFP00000000512	ENSLAFP00000002838	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	Cullin 1; Belongs to the cullin family.	0.627
CDC6	RBX1	ENSLAFP00000000512	ENSLAFP00000007388	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	Ring-box 1.	0.702
CDC6	WDR86	ENSLAFP00000000512	ENSLAFP00000006083	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	WD_REPEATS_REGION domain-containing protein.	0.677
CUL1	CDC6	ENSLAFP00000002838	ENSLAFP00000000512	Cullin 1; Belongs to the cullin family.	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	0.627
CUL1	RBX1	ENSLAFP00000002838	ENSLAFP00000007388	Cullin 1; Belongs to the cullin family.	Ring-box 1.	0.998

page 1 of 3

Server load: low (10%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About