STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD1RAD1 checkpoint DNA exonuclease. (280 aa)    
Predicted Functional Partners:
HUS1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.999
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
    
 0.998
RAD9B
Cell cycle checkpoint control protein; Belongs to the rad9 family.
    
 0.995
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.990
RAD17
RAD17 checkpoint clamp loader component.
   
 0.983
WRN
WRN RecQ like helicase.
   
 0.981
RFC4
Replication factor C subunit 4.
   
 0.974
RFC2
Replication factor C subunit 2.
   
 0.946
RFC3
Replication factor C subunit 3.
   
 0.916
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
    
 0.891
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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