STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC21C2H2-type domain-containing protein. (296 aa)    
Predicted Functional Partners:
G3UB61_LOXAF
J domain-containing protein.
 
      0.900
PA2G4
Peptidase_M24 domain-containing protein.
   
 
 0.771
NMD3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.715
MRPS18B
Mitochondrial ribosomal protein S18B.
    
   0.590
ZNF622
Zinc finger protein 622.
   
 
 0.562
RETREG1
Reticulophagy regulator 1.
   
 
 0.556
EFL1
Elongation factor like GTPase 1.
   
  
 0.507
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.501
HSPA4
Heat shock protein family A (Hsp70) member 4.
    
 
 0.497
RETREG3
Reticulophagy regulator family member 3.
   
 
 0.493
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.