STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA1Von Willebrand factor A domain containing 1. (414 aa)    
Predicted Functional Partners:
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.611
LTBP4
Latent transforming growth factor beta binding protein 4.
   
 0.602
TMEM131L
Transmembrane 131 like.
   
    0.600
COL19A1
Collagen type XIX alpha 1 chain.
   
  
 0.593
FREM2
Uncharacterized protein.
    
 0.518
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.505
CFAP36
Cilia and flagella associated protein 36.
      
 0.496
KLHL17
Kelch like family member 17.
   
 
 0.426
PUSL1
tRNA pseudouridine synthase.
      
 0.419
COL21A1
VWFA domain-containing protein.
 
 
  
0.415
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.