Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCDNNeurochondrin. (729 aa)    
Predicted Functional Partners:
GRM1
Glutamate metabotropic receptor 1.
   
 0.882
GRM5
Uncharacterized protein.
   
 0.805
G3UMG3_LOXAF
G_PROTEIN_RECEP_F3_4 domain-containing protein.
   
 0.805
AAR2
AAR2 splicing factor.
    
 
 0.803
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.790
TTC27
Tetratricopeptide repeat domain 27.
    
 
 0.778
C9orf78
Chromosome 9 open reading frame 78.
    
   0.703
ECD
Ecdysoneless cell cycle regulator.
    
   0.680
EAPP
E2F associated phosphoprotein.
    
 
 0.625
AP3B2
AP-3 complex subunit beta.
   
  
 0.613
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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