STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1HProtein phosphatase, Mg2+/Mn2+ dependent 1H. (435 aa)    
Predicted Functional Partners:
RILPL2
Rab interacting lysosomal protein like 2.
      
 0.571
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.524
ACBD3
Acyl-CoA binding domain containing 3.
    
 
 0.479
RAB35
RAB35, member RAS oncogene family.
    
 
 0.477
RAB29
RAB29, member RAS oncogene family.
    
 
 0.462
RILP
Rab interacting lysosomal protein.
      
 0.451
ILKAP
ILK associated serine/threonine phosphatase.
      
 0.438
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.