Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OXR1Oxidation resistance 1. (787 aa)    
Predicted Functional Partners:
AP3B1
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.601
ATXN3
Josephin domain-containing protein.
      
 0.569
TMEM150A
Transmembrane protein 150A.
      
 0.566
ATP6V1G1
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.552
G3UL95_LOXAF
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.552
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
      
 0.538
CPS1
Carbamoyl-phosphate synthase 1.
     
  0.506
CAD
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
     
  0.506
ATP6V1D
ATPase H+ transporting V1 subunit D.
    
 
 0.500
HCRT
Hypocretin neuropeptide precursor.
      
 0.500
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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