STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (630 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.949
HELLS
Helicase, lymphoid specific.
   
 0.787
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.787
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.739
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.739
COPS8
COP9 signalosome subunit 8.
    
 0.681
COPS4
COP9 signalosome subunit 4.
    
 0.678
RNF7
Ring finger protein 7.
    
 0.677
RBX1
Ring-box 1.
    
 0.677
COPS2
COP9 signalosome subunit 2.
    
 0.674
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.