STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD180CD180 molecule. (661 aa)    
Predicted Functional Partners:
LY86
Lymphocyte antigen 86.
  
 0.997
LY96
ML domain-containing protein.
   
 0.770
CLEC9A
C-type lectin domain containing 9A.
   
 0.598
CD22
CD22 molecule.
   
 0.556
PKHD1L1
PKHD1 like 1.
    
 0.540
CD37
Tetraspanin.
   
 
 0.532
FABP2
Fatty acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.499
CMTM7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.491
TIRAP
TIR domain containing adaptor protein.
   
 0.471
CD79A
CD79a molecule.
   
  
 0.468
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.