STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
P4HA2Prolyl 4-hydroxylase subunit alpha 2. (539 aa)    
Predicted Functional Partners:
P4HB
Protein disulfide-isomerase.
   
 0.959
PYCR3
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
     
 0.906
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
   
  0.901
G3SY41_LOXAF
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
 
 0.884
P4HA3
Prolyl 4-hydroxylase subunit alpha 3.
     
 0.882
DAO
D-amino acid oxidase.
     
 0.873
LAP3
Leucine aminopeptidase 3.
     
 0.872
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 
 0.810
PDIA2
Protein disulfide isomerase family A member 2.
   
 0.809
PYCR2
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
     
 0.796
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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