STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC1006616464Fe-4S ferredoxin-type domain-containing protein. (98 aa)    
Predicted Functional Partners:
KRTAP3-1
Keratin associated protein 3-1.
   
 
  0.748
KRT27
Keratin 27; Belongs to the intermediate filament family.
   
 
 0.594
KRTAP24-1
Keratin associated protein 24-1.
   
 
 0.545
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
 0.533
KRTAP11-1
Keratin associated protein 11-1.
   
 0.531
INO80C
INO80 complex subunit C.
    
 0.492
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.486
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.481
G3TDV6_LOXAF
Uncharacterized protein.
   
 
 0.443
LOC100669964
Uncharacterized protein.
   
 
 0.421
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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