STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNKDPNKD metallo-beta-lactamase domain containing. (420 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
   
 
 0.885
TMEM25
Transmembrane protein 25.
      
 0.665
ASIC4
Acid sensing ion channel subunit family member 4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.658
ANKRD13B
Ankyrin repeat domain 13B.
      
 0.642
TMEM208
Transmembrane protein 208.
      
 0.609
FBXL8
F-box domain-containing protein.
   
  
 0.596
PET117
PET117 cytochrome c oxidase chaperone.
     
 0.589
TMEM230
Transmembrane protein 230.
   
 
 0.587
MCEE
Methylmalonyl-CoA epimerase.
  
 0.584
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 0.584
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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