STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2E3Ubiquitin conjugating enzyme E2 E3; Belongs to the ubiquitin-conjugating enzyme family. (207 aa)    
Predicted Functional Partners:
GCDH
Glutaryl-CoA dehydrogenase.
 
 
  0.908
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.882
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.877
FANCM
FA complementation group M.
    
 0.705
G3SS82_LOXAF
Uncharacterized protein.
    
 0.667
UBA6
Ubiquitin like modifier activating enzyme 6.
  
 0.666
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.660
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.659
UBA7
Ubiquitin like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
  
 0.652
ANAPC11
RING-type domain-containing protein.
    
 0.652
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.