STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NHLH2Nescient helix-loop-helix 2. (135 aa)    
Predicted Functional Partners:
TCF12
Transcription factor 12.
   
 0.568
TCF4
Transcription factor 4.
   
 0.568
TCF3
Transcription factor 3.
   
 0.568
PCSK1
Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family.
    
 
 0.533
LDB2
LIM domain binding 2.
    
 0.524
LDB1
LIM domain binding 1.
    
 0.524
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
      
 0.434
OTP
Orthopedia homeobox.
   
 0.419
DMBX1
Diencephalon/mesencephalon homeobox 1.
   
 0.413
NDN
Necdin, MAGE family member.
      
 0.408
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.