STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRSF2RRM domain-containing protein. (211 aa)    
Predicted Functional Partners:
SRSF1
Uncharacterized protein.
   
 0.987
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.977
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.975
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.961
ALYREF
Aly/REF export factor.
  
 0.957
TRA2A
Transformer 2 alpha homolog.
  
0.957
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.951
G3UC69_LOXAF
RRM domain-containing protein.
   
 0.951
TRA2B
Transformer 2 beta homolog.
  
0.949
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 0.945
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.