STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCM2Glial cells missing transcription factor 2. (506 aa)    
Predicted Functional Partners:
GCM1
Glial cells missing transcription factor 1.
     
 0.873
FOXI3
Forkhead box I3.
   
 
 0.798
FHL3
Four and a half LIM domains 3.
   
   0.782
FOXN1
Forkhead box N1.
    
 
 0.740
PAX9
Paired box 9.
      
 0.727
PTH
Parathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion; Belongs to the parathyroid hormone family.
   
 
 0.690
G3T6E6_LOXAF
HSF_DOMAIN domain-containing protein.
   
   0.685
LOC111748341
HSF_DOMAIN domain-containing protein.
   
   0.685
PAX1
Paired box 1.
      
 0.622
G3UMS0_LOXAF
HSF_DOMAIN domain-containing protein.
   
   0.593
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.