STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPDR1Ependymin related 1. (232 aa)    
Predicted Functional Partners:
AOAH
Acyloxyacyl hydrolase.
      
 0.817
TRMT9B
tRNA methyltransferase 9B (putative).
      
 0.791
GPR141
G protein-coupled receptor 141.
      
 0.728
ANLN
Anillin actin binding protein.
      
 0.722
NME8
NME/NM23 family member 8.
    
 
 0.719
DLC1
DLC1 Rho GTPase activating protein.
      
 0.695
LONRF1
LON peptidase N-terminal domain and ring finger 1.
      
 0.688
NHS
NHS actin remodeling regulator.
    
 
 0.642
ELMO1
Engulfment and cell motility 1.
      
 0.635
CPD
Carboxypeptidase D.
      
 0.597
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.