STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
METTL16U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (597 aa)    
Predicted Functional Partners:
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
  
 0.835
WTAP
WT1 associated protein.
      
 0.794
MEPCE
Methylphosphate capping enzyme.
    
 
 0.768
ALKBH5
AlkB homolog 5, RNA demethylase.
   
  
 0.741
VIRMA
Vir like m6A methyltransferase associated.
    
 
 0.684
METTL5
Methyltransferase like 5.
      
 0.671
BCDIN3D
BCDIN3 domain containing RNA methyltransferase.
    
 
 0.668
ZCCHC4
Zinc finger CCHC-type containing 4.
   
  
 0.654
METTL4
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.653
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
      
 0.653
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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