STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T076_LOXAFUncharacterized protein. (1558 aa)    
Predicted Functional Partners:
BOD1
Uncharacterized protein.
 
      0.899
CXXC1
CXXC finger protein 1.
   
 0.785
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.785
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.781
NEU1
Neuraminidase 1.
  
 0.593
WDR5
WD repeat domain 5.
   
 0.587
WDR5B
WD repeat domain 5B.
   
 0.587
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
   
 0.565
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.565
MSL3
MSL complex subunit 3.
   
 
 0.550
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.