STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3T076_LOXAFUncharacterized protein. (1558 aa)    
Predicted Functional Partners:
BOD1
Uncharacterized protein.
 
      0.899
NEU1
Neuraminidase 1.
  
 0.587
CTSA
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.479
G3U1Z2_LOXAF
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.479
FAM149B1
Family with sequence similarity 149 member B1.
 
 
 0.453
ZNF496
Zinc finger protein 496.
  
  
 0.450
ARMH4
Armadillo like helical domain containing 4.
  
     0.445
SCEL
Sciellin.
  
     0.443
CPVL
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
   
 0.437
NEU4
Neuraminidase 4.
   
 
 0.417
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.