STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDXDC1Pyridoxal dependent decarboxylase domain containing 1. (788 aa)    
Predicted Functional Partners:
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.588
BAHD1
Bromo adjacent homology domain containing 1.
      
 0.573
BFAR
Bifunctional apoptosis regulator.
      
 0.552
NTAN1
N-terminal asparagine amidase.
      
 0.543
PAGR1
PAXIP1 associated glutamate rich protein 1.
      
 0.543
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
      
 0.522
CCDC6
Coiled-coil domain containing 6.
      
 0.522
RGL2
Ral guanine nucleotide dissociation stimulator like 2.
      
 0.522
TATDN2
Uncharacterized protein.
      
 0.508
THRAP3
Thyroid hormone receptor associated protein 3.
      
 0.476
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.