STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T083_LOXAFUncharacterized protein. (1445 aa)    
Predicted Functional Partners:
G3U872_LOXAF
Uncharacterized protein.
 
 
  0.974
FREM2
Uncharacterized protein.
   
 0.914
FREM1
FRAS1 related extracellular matrix 1.
   
 0.901
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 
 0.888
NPNT
Nephronectin.
    
 0.887
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.872
PTPRK
Protein tyrosine phosphatase receptor type K.
   
 0.843
EDN3
Uncharacterized protein.
      
 0.829
ITGA2B
Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.
   
 
 0.619
SLC8A1
J domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
 0.581
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.