STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3T083_LOXAFUncharacterized protein. (1445 aa)    
Predicted Functional Partners:
G3U872_LOXAF
Uncharacterized protein.
 
 
 
 0.953
PTPRK
Protein tyrosine phosphatase receptor type K.
   
 
 0.747
EDN3
Uncharacterized protein.
      
 0.724
FREM1
FRAS1 related extracellular matrix 1.
   
 
0.613
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
   
 0.609
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 0.609
RXFP2
Relaxin family peptide receptor 2.
   
 0.609
RXFP1
Relaxin family peptide receptor 1.
   
 0.609
FREM2
Uncharacterized protein.
   
0.590
TNFAIP6
TNF alpha induced protein 6.
   
 
 0.575
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.