STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC41Leucine rich repeat containing 41. (813 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.641
RHOBTB3
Rho related BTB domain containing 3.
    
 0.560
RBX1
Ring-box 1.
    
 0.545
RNF7
Ring finger protein 7.
    
 0.504
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.466
ASB6
Ankyrin repeat and SOCS box containing 6.
     
 0.421
ASB2
Ankyrin repeat and SOCS box containing 2.
     
 0.414
ASB12
Ankyrin repeat and SOCS box containing 12.
     
 0.412
ASB7
Ankyrin repeat and SOCS box containing 7.
     
 0.410
WSB1
WD repeat and SOCS box containing 1.
     
 0.403
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.