STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTR3A5-hydroxytryptamine receptor 3A; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (508 aa)    
Predicted Functional Partners:
G3SRN7_LOXAF
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.788
HTR3C
5-hydroxytryptamine receptor 3C; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
0.788
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
      
 0.608
LRP2
LDL receptor related protein 2.
     
 0.555
FLT4
Fms related tyrosine kinase 4.
      
 0.542
NRP2
Neuropilin; Belongs to the neuropilin family.
      
 0.522
MRPL58
Mitochondrial ribosomal protein L58.
     
  0.516
GABARAPL2
GABA type A receptor associated protein like 2.
      
 0.511
G3TJX5_LOXAF
Uncharacterized protein.
      
 0.491
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.487
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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