STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUNH5orf42Uncharacterized protein. (1117 aa)    
Predicted Functional Partners:
G3TLI7_LOXAF
Uncharacterized protein.
 
      0.899
G3U3E6_LOXAF
Uncharacterized protein.
 
      0.899
INTU
Inturned planar cell polarity protein.
    
 
 0.745
G3UNS7_LOXAF
Uncharacterized protein.
    
 
 0.734
NUP155
Nucleoporin 155.
 
    
 0.559
RPGRIP1L
RPGRIP1 like.
    
 
 0.466
G3TH52_LOXAF
Uncharacterized protein.
    
 
 0.446
WDR70
WD repeat domain 70.
      
 0.419
TDRD5
Tudor domain containing 5.
  
     0.400
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.