STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCLK1Doublecortin like kinase 1. (754 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
   
 
 0.951
TRPM5
Transient receptor potential cation channel subfamily M member 5.
   
  
 0.804
TRPC5
Transient receptor potential cation channel subfamily C member 5; Belongs to the transient receptor (TC 1.A.4) family.
   
  
 0.635
IL25
Interleukin 25.
      
 0.625
DBH
Dopamine beta-hydroxylase.
      
 0.622
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.615
ARVCF
ARVCF delta catenin family member.
   
  
 0.600
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.597
GALNT16
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.571
SLC5A7
Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.568
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.