STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf58Chromosome 11 open reading frame 58. (182 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
    0.659
G3U9C6_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
   
    0.659
G3ULX5_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
   
    0.659
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
   
    0.587
ECRG4
ECRG4 augurin precursor.
      
 0.544
NSFL1C
NSFL1 cofactor.
   
  
 0.524
MAPK1IP1L
Mitogen-activated protein kinase 1 interacting protein 1 like.
   
  
 0.510
GPR142
G protein-coupled receptor 142; Belongs to the G-protein coupled receptor 1 family.
      
 0.486
PCNP
PEST proteolytic signal containing nuclear protein.
   
    0.464
LOC100668865
PC4 domain-containing protein.
   
    0.456
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.