STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCN2Transcobalamin 2. (428 aa)    
Predicted Functional Partners:
G3TCM8_LOXAF
Uncharacterized protein.
    
 0.927
AMN
Amnion associated transmembrane protein.
     
 0.558
CBL
Cbl proto-oncogene.
    
 
 0.553
LRP2
LDL receptor related protein 2.
   
 0.536
LMBRD1
LMBR1 domain containing 1.
      
 0.534
OAF
Out at first homolog.
      
 0.526
LDLR
Low density lipoprotein receptor.
   
 0.508
CUBN
Cubilin.
   
 0.502
LRP4
LDL receptor related protein 4.
   
 0.494
LRP8
LDL receptor related protein 8.
   
 0.459
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.