STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCN2Transcobalamin 2. (428 aa)    
Predicted Functional Partners:
G3TCM8_LOXAF
Uncharacterized protein.
    
 0.991
LRP2
LDL receptor related protein 2.
   
 0.831
CUBN
Cubilin.
    
 0.679
CDCP2
CUB domain containing protein 2.
    
 0.610
TMEM37
Transmembrane protein 37.
   
  
 0.602
LRP4
LDL receptor related protein 4.
   
 0.598
CYB561A3
Cytochrome b561 family member A3.
   
  
 0.592
AMN
Amnion associated transmembrane protein.
     
 0.589
LMBRD1
LMBR1 domain containing 1.
      
 0.582
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
     
  0.578
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.