STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC2UBA domain containing 2. (345 aa)    
Predicted Functional Partners:
FAF2
Fas associated factor family member 2.
    
 
 0.954
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.926
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.916
UBXN8
UBX domain protein 8.
    
 
 0.836
FAF1
Fas associated factor 1.
    
 
 0.763
FAAP100
FA core complex associated protein 100.
    
 
 0.678
AMFR
Autocrine motility factor receptor.
    
 
 0.671
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
  
 0.592
EMC1
ER membrane protein complex subunit 1.
    
 
 0.588
EMC3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 
 0.587
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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