STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPM1Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
NCL
Nucleolin.
   
 
 0.807
CASP2
Caspase 2; Belongs to the peptidase C14A family.
   
 
 0.667
FLT3
Fms related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.664
HJURP
Uncharacterized protein.
    
 0.605
CDKN2B
Cyclin dependent kinase inhibitor 2B.
    
 
 0.551
NOP58
NOP58 ribonucleoprotein.
   
  
 0.542
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.540
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.538
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.538
RPL5
Ribosomal_L18_c domain-containing protein.
   
 
 0.537
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.