STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP32Uncharacterized protein; Belongs to the peptidase C19 family. (1605 aa)    
Predicted Functional Partners:
FAM162B
Family with sequence similarity 162 member B.
    
 
 0.825
TMEM167A
Protein kish; Involved in the early part of the secretory pathway.
      
 0.804
WDR7
WD repeat domain 7.
   
 
 0.717
APPBP2
Amyloid beta precursor protein binding protein 2.
   
  
 0.709
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
   
 
 0.704
YPEL5
Protein yippee-like; Belongs to the yippee family.
   
  
 0.684
GUSB
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
      
 0.676
USP14
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.650
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.618
CDC16
Cell division cycle 16.
      
 0.616
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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