Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPAP3RNA polymerase II associated protein 3. (666 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.993
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.986
WDR92
WD repeat domain 92.
   
 0.983
PFDN6
Prefoldin subunit 6.
   
 0.983
PIH1D1
PIH1 domain containing 1.
   
 0.982
PDRG1
P53 and DNA damage regulated 1.
    
 0.976
PFDN2
Prefoldin subunit 2.
   
 0.973
POLR2E
RNA polymerase II subunit E.
   
 0.973
UXT
Ubiquitously expressed prefoldin like chaperone.
    
 0.971
URI1
URI1 prefoldin like chaperone.
    
 0.964
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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