STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PARD3BUncharacterized protein. (309 aa)    
Predicted Functional Partners:
G3U0S3_LOXAF
PDZ domain-containing protein.
 
      0.900
G3U344_LOXAF
Uncharacterized protein.
 
      0.900
G3U700_LOXAF
Uncharacterized protein.
 
      0.900
SUOX
Sulfite oxidase.
     
  0.790
PRKCI
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.686
PRKCZ
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.686
PARD6G
Par-6 family cell polarity regulator gamma.
   
 0.631
PARD6B
Par-6 family cell polarity regulator beta.
   
 0.631
PARD6A
Par-6 family cell polarity regulator alpha.
   
 0.631
JAM3
Junctional adhesion molecule 3.
    
 0.627
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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