STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNL1Cyclin L1; Belongs to the cyclin family. (426 aa)    
Predicted Functional Partners:
G3TW51_LOXAF
Protein kinase domain-containing protein.
   
 
 0.872
CCNL2
Cyclin L2; Belongs to the cyclin family.
   
   0.817
SAP30BP
SAP30 binding protein.
    
   0.802
ILF3
Interleukin enhancer binding factor 3.
    
   0.778
CDK10
Cyclin dependent kinase 10; Belongs to the protein kinase superfamily.
   
 
 0.709
ZNF276
Zinc finger protein 276.
   
  
 0.694
GPATCH2
G-patch domain containing 2.
   
 
 0.681
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
   0.657
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
   
 
 0.653
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
      
 0.620
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.