STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CENPJCentromere protein J. (1355 aa)    
Predicted Functional Partners:
STIL
STIL centriolar assembly protein.
   
 0.985
SASS6
SAS-6 centriolar assembly protein.
   
 0.967
PLK1
Serine/threonine-protein kinase PLK.
   
 0.961
PLK4
Polo like kinase 4.
   
 0.947
ITSN2
Intersectin 2.
   
 0.923
G3U095_LOXAF
Uncharacterized protein.
   
 0.923
CEP135
Uncharacterized protein.
   
 0.905
TUBG2
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 
 0.890
CEP152
Centrosomal protein 152.
   
 0.887
PCNT
Pericentrin.
   
 0.862
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.