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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H2Prolyl 3-hydroxylase 2. (703 aa)    
Predicted Functional Partners:
P3H4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
0.707
COL12A1
Collagen type XII alpha 1 chain.
    
 0.686
COL18A1
Collagen type XVIII alpha 1 chain.
   
 
 0.679
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.657
P4HB
Protein disulfide-isomerase.
   
 0.557
PPIC
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.543
P4HA2
Prolyl 4-hydroxylase subunit alpha 2.
   
  
 0.530
SEMA3C
Semaphorin 3C; Belongs to the semaphorin family.
   
  
 0.512
SEMA3G
Semaphorin 3G; Belongs to the semaphorin family.
      
 0.502
COL6A2
Collagen type VI alpha 2 chain.
   
 0.477
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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