STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WFDC13Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
    
 0.595
SPINT4
BPTI/Kunitz inhibitor domain-containing protein.
   
 
 0.553
WFDC9
WAP four-disulfide core domain 9.
      
 0.524
DHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.412
IHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.412
SHH
Sonic hedgehog signaling molecule.
    
 0.412
KALRN
Uncharacterized protein.
   
 
  0.411
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 
  0.411
G3U587_LOXAF
WAP domain-containing protein.
   
 
 0.408
G3U7R5_LOXAF
WAP domain-containing protein.
   
 
 0.408
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.